Journal: The Journal of Biological Chemistry
Article Title: Structural and functional insights into calmodulin-mediated lipid binding and proteolytic cleavage of the M-PMV matrix protein
doi: 10.1016/j.jbc.2025.111102
Figure Lengend Snippet: Model of myrMAPP-CaM complex . A , structure of HIV-1 MA(8–43)-CaM complex published by Vlach et al . (PDB entry 2mgu) . CaM is colored in cyan , HIV-1 MA(8–43) in magenta and calcium ions in red . NTD – N-terminal domain, CTD – C-terminal domain. B , NMR chemical shift changes and differential HDX relative fractional uptake detected for CaM interacting with M-PMV myrMAPP mapped onto the published structure of free CaM and CaM in complex with HIV-1 MA(8–43) . Free CaM (PDB 1Cll) is shown on the left , and CaM, as observed in the complex with HIV-1 MA(8–43) on the right , both colored according to our M-PMV myrMAPP interaction results. Top panels : NMR chemical shifts, with residues showing shifts in orange and residues without detectable shifts in cyan . Bottom panels : Differential HDX relative fractional uptake, where differential deuterium uptake at 20 s is indicated by the intensity of blue coloring. C , structure of M-PMV MAPP ( gray ) in complex with CaM (cyan) calculated by HADDOCK with visualized identified cross-links between myrMAPP and CaM. Cross-links meeting the maximal distance of 35 Å are depicted as green dashes, cross-links exceeding the maximum distance of 35 Å are depicted as red dash. D , structure of M-PMV myrMAPP ( gray ) in complex with CaM ( cyan ) calculated by HADDOCK with visualized chemical shifts detected by NMR. Residues with chemical shifts detected in equimolar ratio of proteins in the analyzed myrMAPP sample are colored in orange , whereas those detected in the sample with increased concentration of CaM (1:5) are colored in blue , which also comprises the orange residues. E , structure of M-PMV MAPP in complex with CaM calculated by HADDOCK with visualized differential HDX relative fractional uptake. Degree of deuteration is shown as intensity of blue and red color. F , structure of M-PMV MAPP ( gray ) in complex with CaM ( cyan ) calculated by HADDOCK with visualized individual functional regions of MA. Residues in MA involved in MA oligomerization are colored in yellow ( , ), residues interacting with PI(4,5)P 2 are shown in magenta , residues interacting with the M-PMV cytotail are colored in green . Additionally, residue that interacts with both the M-PMV cytotail and PI(4,5)P 2 is colored blue and residue that interacts with the cytotail and also involved in oligomerization is colored in red .
Article Snippet: The matrix (MA) domain of the Mason-Pfizer monkey virus (M-PMV) Gag polyprotein plays a central role in retroviral assembly and trafficking, coordinating membrane association and proteolytic maturation.
Techniques: Concentration Assay, Functional Assay, Residue